Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000011646Si:dkey-16i5.8. (149 aa)    
Predicted Functional Partners:
ENSENLP00000048193
annotation not available
    
   0.712
ENSENLP00000027901
WD repeat domain 90.
    
   0.577
LOC115060272
Serum response factor-like.
    
 0.556
SRF
Serum response factor.
    
 0.556
LOC115049668
LIM domain-binding protein 2.
    
 0.516
LOC115055442
LIM domain-binding protein 1-A-like.
    
 0.516
LOC115044302
LIM domain-binding protein 1.
    
 0.516
smim4
Small integral membrane protein 4.
      
 0.507
ENSENLP00000046616
Transmembrane protein 97.
    
 
 0.480
ldah
Lipid droplet associated hydrolase.
      
 0.475
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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