STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115056508Enhancer of mRNA-decapping protein 3-like. (478 aa)    
Predicted Functional Partners:
dcp1b
Decapping mRNA 1B.
   
 0.983
dcp1a
Decapping mRNA 1A.
   
 0.974
dcp2
Decapping mRNA 2.
  
 0.973
patl1
PAT1 homolog 1, processing body mRNA decay factor.
    
 0.963
ENSENLP00000048915
PAT1 homolog 2.
    
 0.963
LOC115050645
Probable ATP-dependent RNA helicase ddx6.
   
 0.958
ddx6
DEAD-box helicase 6.
   
 0.958
LOC115044706
Probable ATP-dependent RNA helicase ddx6.
   
 0.958
edc4
Enhancer of mRNA decapping 4.
   
 0.951
lsm2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.905
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.