Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115056508Enhancer of mRNA-decapping protein 3-like. (478 aa)    
Predicted Functional Partners:
dcp1a
Decapping mRNA 1A.
   
 0.991
edc4
Enhancer of mRNA decapping 4.
   
 0.991
dcp2
Decapping mRNA 2.
  
 0.991
dcp1b
Decapping mRNA 1B.
   
 0.984
LOC115050645
Probable ATP-dependent RNA helicase ddx6.
   
 0.963
ddx6
DEAD-box helicase 6.
   
 0.963
LOC115044706
Probable ATP-dependent RNA helicase ddx6.
   
 0.963
ENSENLP00000027421
5'-3' exoribonuclease 1.
   
 
 0.945
lsm2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.944
patl1
PAT1 homolog 1, processing body mRNA decay factor.
    
 0.935
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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