ENSENLP00000011805 protein (Echeneis naucrates)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSENLP00000011805

Ubiquitin-fold modifier conjugating enzyme 1. (169 aa)

Predicted Functional Partners:

uba5

0.979

ENSENLP00000027910

0.951

ddrgk1

0.836

ufl1

0.819

mocs3

0.769

ENSENLP00000010772

0.677

UBA3

0.668

ENSENLP00000015432

0.668

LOC115043790

0.664

ENSENLP00000012386

0.664

Your Current Organism:

Echeneis naucrates

NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSENLP00000010772	ENSENLP00000011805	ENSENLP00000010772	ENSENLP00000011805	SUMO1 activating enzyme subunit 1.	Ubiquitin-fold modifier conjugating enzyme 1.	0.677
ENSENLP00000010772	ENSENLP00000012386	ENSENLP00000010772	ENSENLP00000012386	SUMO1 activating enzyme subunit 1.	Ubiquitin-like modifier activating enzyme 2.	0.999
ENSENLP00000010772	ENSENLP00000015432	ENSENLP00000010772	ENSENLP00000015432	SUMO1 activating enzyme subunit 1.	Ubiquitin-like modifier activating enzyme 3.	0.464
ENSENLP00000010772	ENSENLP00000027910	ENSENLP00000010772	ENSENLP00000027910	SUMO1 activating enzyme subunit 1.	Ubiquitin-fold modifier 1.	0.675
ENSENLP00000010772	LOC115043790	ENSENLP00000010772	ENSENLP00000004907	SUMO1 activating enzyme subunit 1.	Ubiquitin-like modifier-activating enzyme 1.	0.755
ENSENLP00000010772	UBA3	ENSENLP00000010772	ENSENLP00000010377	SUMO1 activating enzyme subunit 1.	NEDD8-activating enzyme E1 catalytic subunit-like.	0.464
ENSENLP00000010772	uba5	ENSENLP00000010772	ENSENLP00000051449	SUMO1 activating enzyme subunit 1.	Ubiquitin like modifier activating enzyme 5.	0.483
ENSENLP00000010772	ufl1	ENSENLP00000010772	ENSENLP00000037364	SUMO1 activating enzyme subunit 1.	UFM1 specific ligase 1.	0.458
ENSENLP00000011805	ENSENLP00000010772	ENSENLP00000011805	ENSENLP00000010772	Ubiquitin-fold modifier conjugating enzyme 1.	SUMO1 activating enzyme subunit 1.	0.677
ENSENLP00000011805	ENSENLP00000012386	ENSENLP00000011805	ENSENLP00000012386	Ubiquitin-fold modifier conjugating enzyme 1.	Ubiquitin-like modifier activating enzyme 2.	0.664
ENSENLP00000011805	ENSENLP00000015432	ENSENLP00000011805	ENSENLP00000015432	Ubiquitin-fold modifier conjugating enzyme 1.	Ubiquitin-like modifier activating enzyme 3.	0.668
ENSENLP00000011805	ENSENLP00000027910	ENSENLP00000011805	ENSENLP00000027910	Ubiquitin-fold modifier conjugating enzyme 1.	Ubiquitin-fold modifier 1.	0.951
ENSENLP00000011805	LOC115043790	ENSENLP00000011805	ENSENLP00000004907	Ubiquitin-fold modifier conjugating enzyme 1.	Ubiquitin-like modifier-activating enzyme 1.	0.664
ENSENLP00000011805	UBA3	ENSENLP00000011805	ENSENLP00000010377	Ubiquitin-fold modifier conjugating enzyme 1.	NEDD8-activating enzyme E1 catalytic subunit-like.	0.668
ENSENLP00000011805	ddrgk1	ENSENLP00000011805	ENSENLP00000020286	Ubiquitin-fold modifier conjugating enzyme 1.	DDRGK domain containing 1.	0.836
ENSENLP00000011805	mocs3	ENSENLP00000011805	ENSENLP00000033161	Ubiquitin-fold modifier conjugating enzyme 1.	Molybdenum cofactor synthesis 3.	0.769
ENSENLP00000011805	uba5	ENSENLP00000011805	ENSENLP00000051449	Ubiquitin-fold modifier conjugating enzyme 1.	Ubiquitin like modifier activating enzyme 5.	0.979
ENSENLP00000011805	ufl1	ENSENLP00000011805	ENSENLP00000037364	Ubiquitin-fold modifier conjugating enzyme 1.	UFM1 specific ligase 1.	0.819
ENSENLP00000012386	ENSENLP00000010772	ENSENLP00000012386	ENSENLP00000010772	Ubiquitin-like modifier activating enzyme 2.	SUMO1 activating enzyme subunit 1.	0.999
ENSENLP00000012386	ENSENLP00000011805	ENSENLP00000012386	ENSENLP00000011805	Ubiquitin-like modifier activating enzyme 2.	Ubiquitin-fold modifier conjugating enzyme 1.	0.664