STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000011809Si:dkey-14o18.2. (414 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
    
 0.877
eprs1
glutamyl-prolyl-tRNA synthetase 1.
   
   0.817
ENSENLP00000047345
Thyroid hormone receptor interactor 12.
   
 
 0.810
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.808
ENSENLP00000023081
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.808
rps27a
Ribosomal protein S27a.
    
 0.793
ENSENLP00000035060
annotation not available
    
 0.793
mars1
methionyl-tRNA synthetase 1.
    
   0.772
ENSENLP00000004347
Ubiquitin B.
    
 0.674
ENSENLP00000022805
ISG15 ubiquitin like modifier.
    
 0.674
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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