Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rhbdd1Rhomboid domain containing 1. (320 aa)    
Predicted Functional Partners:
vcp
Valosin containing protein.
    
 
 0.903
ndufb7
NADH:ubiquinone oxidoreductase subunit B7.
    
 
 0.903
klhl31
Kelch like family member 31.
      
 0.806
tmem70
Transmembrane protein 70.
      
 0.732
tmem214
Transmembrane protein 214.
      
 0.716
ENSENLP00000010772
SUMO1 activating enzyme subunit 1.
      
 0.701
LOC115046962
Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q-like.
     
  0.700
tmem38a
Transmembrane protein 38A.
      
 0.700
pigc
Phosphatidylinositol glycan anchor biosynthesis class C.
     
  0.700
dpm2
Dolichyl-phosphate mannosyltransferase subunit 2, regulatory.
     
  0.700
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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