STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115047865Riboflavin-binding protein-like. (282 aa)    
Predicted Functional Partners:
ENSENLP00000035431
RAD18 E3 ubiquitin protein ligase.
      
 0.611
rad17
RAD17 checkpoint clamp loader component.
      
 0.534
fancl
FA complementation group L.
      
 0.523
tsen2
tRNA splicing endonuclease subunit 2.
    
   0.486
atp23
ATP23 metallopeptidase and ATP synthase assembly factor homolog.
      
 0.471
rcvrn
Recoverin.
   
    0.432
LOC115050878
Recoverin-like.
   
    0.432
LOC115044846
Visinin-like.
   
    0.432
LYZ
Lysozyme.
      
 0.427
ENSENLP00000038280
Cystatin C (amyloid angiopathy and cerebral hemorrhage).
      
 0.415
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (28%) [HD]