STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pus7Pseudouridine synthase 7. (631 aa)    
Predicted Functional Partners:
nop58
NOP58 ribonucleoprotein.
   
 
 0.980
ENSENLP00000023282
Dyskeratosis congenita 1, dyskerin.
   
 
 0.978
nop56
NOP56 ribonucleoprotein.
   
 
 0.977
ENSENLP00000009266
NHP2 ribonucleoprotein homolog (yeast).
  
 0.973
noc3l
NOC3 like DNA replication regulator.
   
   0.961
snu13
Small nuclear ribonucleoprotein 13.
  
 0.953
ENSENLP00000033575
GAR1 homolog, ribonucleoprotein.
   
 0.940
rrp9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 
  0.939
mphosph10
M-phase phosphoprotein 10.
   
 
  0.938
pop4
POP4 homolog, ribonuclease P/MRP subunit.
   
 
 0.930
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.