Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
LOC115047839Cysteine protease ATG4D-like. (474 aa)    
Predicted Functional Partners:
gabarap
GABA type A receptor-associated protein.
   
 0.987
ENSENLP00000006231
annotation not available
   
 0.984
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.984
map1lc3c
Microtubule associated protein 1 light chain 3 gamma.
   
 0.982
ENSENLP00000010579
Microtubule-associated protein 1 light chain 3 alpha.
   
 0.980
ENSENLP00000012870
Microtubule-associated protein 1 light chain 3 beta.
   
 0.980
LOC115044853
Gamma-aminobutyric acid receptor-associated protein-like 1.
   
 0.960
LOC115050025
Microtubule-associated proteins 1A/1B light chain 3C-like.
   
 0.953
atg3
Autophagy related 3.
   
 
 0.915
ENSENLP00000025480
Autophagy related 4B, cysteine peptidase.
     
  0.878
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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