Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
byslBystin like. (436 aa)    
Predicted Functional Partners:
pno1
Partner of NOB1 homolog.
   
 0.999
ENSENLP00000008358
annotation not available
   
 0.999
tsr1
TSR1 ribosome maturation factor.
   
 0.999
ENSENLP00000009191
LTV1 ribosome biogenesis factor.
   
 0.999
rrp12
Ribosomal RNA processing 12 homolog.
   
 
 0.998
nop14
NOP14 nucleolar protein.
   
 0.998
riok2
RIO kinase 2.
   
 0.998
noc4l
Nucleolar complex associated 4 homolog.
   
 0.997
ENSENLP00000010067
BMS1 ribosome biogenesis factor.
   
 
 0.995
nol10
Nucleolar protein 10.
   
 
 0.995
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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