LOC115052453 protein (Echeneis naucrates) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC115052453

Sorting nexin-18-like. (556 aa)

Predicted Functional Partners:

LOC115057907

0.892

pik3cd

0.892

pik3cg

0.892

LOC115045703

0.892

pik3cb

0.892

ENSENLP00000018922

0.890

pik3c2a

0.890

pik3c2b

0.890

ENSENLP00000027705

0.889

LOC115042209

0.889

Your Current Organism:

Echeneis naucrates

NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSENLP00000018922	ENSENLP00000027705	ENSENLP00000018922	ENSENLP00000027705	annotation not available	annotation not available	0.769
ENSENLP00000018922	LOC115042209	ENSENLP00000018922	ENSENLP00000028039	annotation not available	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform-like.	0.769
ENSENLP00000018922	LOC115045703	ENSENLP00000018922	ENSENLP00000035974	annotation not available	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform-like.	0.826
ENSENLP00000018922	LOC115052453	ENSENLP00000018922	ENSENLP00000012113	annotation not available	Sorting nexin-18-like.	0.890
ENSENLP00000018922	LOC115057907	ENSENLP00000018922	ENSENLP00000005160	annotation not available	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform.	0.769
ENSENLP00000018922	pik3c2a	ENSENLP00000018922	ENSENLP00000049439	annotation not available	Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha.	0.941
ENSENLP00000018922	pik3c2b	ENSENLP00000018922	ENSENLP00000053454	annotation not available	Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta.	0.941
ENSENLP00000018922	pik3cb	ENSENLP00000018922	ENSENLP00000036740	annotation not available	Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta.	0.769
ENSENLP00000018922	pik3cd	ENSENLP00000018922	ENSENLP00000016330	annotation not available	Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta.	0.769
ENSENLP00000018922	pik3cg	ENSENLP00000018922	ENSENLP00000019823	annotation not available	Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma.	0.826
ENSENLP00000027705	ENSENLP00000018922	ENSENLP00000027705	ENSENLP00000018922	annotation not available	annotation not available	0.769
ENSENLP00000027705	LOC115042209	ENSENLP00000027705	ENSENLP00000028039	annotation not available	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform-like.	0.542
ENSENLP00000027705	LOC115045703	ENSENLP00000027705	ENSENLP00000035974	annotation not available	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform-like.	0.945
ENSENLP00000027705	LOC115052453	ENSENLP00000027705	ENSENLP00000012113	annotation not available	Sorting nexin-18-like.	0.889
ENSENLP00000027705	LOC115057907	ENSENLP00000027705	ENSENLP00000005160	annotation not available	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform.	0.941
ENSENLP00000027705	pik3c2a	ENSENLP00000027705	ENSENLP00000049439	annotation not available	Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha.	0.769
ENSENLP00000027705	pik3c2b	ENSENLP00000027705	ENSENLP00000053454	annotation not available	Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta.	0.769
ENSENLP00000027705	pik3cb	ENSENLP00000027705	ENSENLP00000036740	annotation not available	Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta.	0.941
ENSENLP00000027705	pik3cd	ENSENLP00000027705	ENSENLP00000016330	annotation not available	Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta.	0.941
ENSENLP00000027705	pik3cg	ENSENLP00000027705	ENSENLP00000019823	annotation not available	Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma.	0.901