STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vwc2Von Willebrand factor C domain containing 2. (308 aa)    
Predicted Functional Partners:
ENSENLP00000035564
Shisa family member 7a.
     
 0.926
nrn1
Neuritin 1.
     
 0.919
porcn
Porcupine O-acyltransferase.
     
 0.817
ENSENLP00000042755
annotation not available
     
 0.817
ENSENLP00000026369
Si:ch211-248l17.3.
      
 0.495
ENSENLP00000026534
Intraflagellar transport 140 homolog (Chlamydomonas).
      
 0.487
rrp36
Ribosomal RNA processing 36.
      
 0.477
TMEM43
Transmembrane protein 43.
      
 0.475
kbtbd12
Kelch repeat and BTB domain containing 12.
      
 0.475
chrd
Chordin.
      
 0.471
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.