Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
chst10Carbohydrate sulfotransferase 10. (366 aa)    
Predicted Functional Partners:
b3gat2
Beta-1,3-glucuronyltransferase 2.
     
 0.926
LOC115052959
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1.
     
 0.920
B3GAT1
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like.
     
 0.920
b3gat3
Beta-1,3-glucuronyltransferase 3.
     
 0.786
LOC115046738
Dystroglycan-like.
     
 0.728
LOC115044007
Dystroglycan-like.
     
 0.728
usp40
Ubiquitin specific peptidase 40.
      
 0.672
rpl31
Ribosomal protein L31.
      
 0.672
LOC115047349
Carbohydrate sulfotransferase 12-like.
     
 0.663
chst12
Carbohydrate sulfotransferase 12.
     
 0.663
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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