STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115054652Vacuolar protein sorting-associated protein 37D-like. (300 aa)    
Predicted Functional Partners:
vps28
VPS28 subunit of ESCRT-I.
   
 0.992
mvb12a
Multivesicular body subunit 12A.
   
 0.983
LOC115056408
Ubiquitin-conjugating enzyme E2 variant 3-like.
    
 0.982
vps25
Vacuolar protein sorting 25 homolog.
    
 0.965
mvb12b
Multivesicular body subunit 12B.
   
 0.960
ENSENLP00000048215
Multivesicular body subunit 12Bb.
   
 0.960
tsg101
Tumor susceptibility 101.
    
 0.956
ENSENLP00000021869
annotation not available
    
 0.956
chmp2a
Charged multivesicular body protein 2A.
    
 0.951
snf8
SNF8 subunit of ESCRT-II.
     
 0.948
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.