STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115054652Vacuolar protein sorting-associated protein 37D-like. (300 aa)    
Predicted Functional Partners:
vps28
VPS28 subunit of ESCRT-I.
    
 0.987
mvb12b
Multivesicular body subunit 12B.
   
 0.971
ENSENLP00000048215
Multivesicular body subunit 12Bb.
   
 0.971
mvb12a
Multivesicular body subunit 12A.
   
 0.959
vps37a
VPS37A subunit of ESCRT-I.
     
0.954
vps37c
VPS37C subunit of ESCRT-I.
     
0.947
vps37b
VPS37B subunit of ESCRT-I.
     
0.945
snf8
SNF8 subunit of ESCRT-II.
    
 0.941
ENSENLP00000054124
Vacuolar protein sorting 36 homolog.
    
 0.924
vps25
Vacuolar protein sorting 25 homolog.
    
 0.923
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.