Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000012146Bromodomain and WD repeat domain containing 1. (1560 aa)    
Predicted Functional Partners:
ddb1
Damage specific DNA binding protein 1.
    
 
 0.858
ubxn7
UBX domain protein 7.
   
 0.844
mysm1
Myb like, SWIRM and MPN domains 1.
   
 0.817
LOC115054819
Transcription initiation factor TFIID subunit 1-like.
   
 0.692
kif7
Kinesin family member 7.
   
 0.685
gkap1
G kinase anchoring protein 1.
   
 0.685
ENSENLP00000024066
Cullin 4B.
   
 
 0.676
ENSENLP00000040199
Cullin 4A.
   
 
 0.676
bub3
BUB3 mitotic checkpoint protein.
   
 0.674
ofd1
OFD1 centriole and centriolar satellite protein.
    
 
 0.673
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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