Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115041523EGF-like repeat and discoidin I-like domain-containing protein 3. (483 aa)    
Predicted Functional Partners:
LOC115056451
EGF-like repeat and discoidin I-like domain-containing protein 3.
     
  0.881
itgav
Integrin subunit alpha V.
     
  0.879
ENSENLP00000037709
Integrin, alpha 5 (fibronectin receptor, alpha polypeptide).
     
  0.865
ENSENLP00000045803
annotation not available
     
  0.865
itga8
Integrin subunit alpha 8.
     
  0.706
ENSENLP00000043811
Integrin, alpha 2b.
     
  0.706
ITGA7
Integrin subunit alpha 7.
     
  0.595
ENSENLP00000036140
Integrin, alpha 6b.
     
  0.595
itga3
Integrin subunit alpha 3.
     
  0.595
ENSENLP00000041683
Integrin alpha 4.
     
  0.595
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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