Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cdk20Cyclin dependent kinase 20. (344 aa)    
Predicted Functional Partners:
ccnh
Cyclin H.
   
 0.990
mnat1
MNAT1 component of CDK activating kinase.
   
 0.964
ercc2
ERCC excision repair 2, TFIIH core complex helicase subunit.
    
 0.953
ercc3
ERCC excision repair 3, TFIIH core complex helicase subunit.
    
 0.952
gtf2h3
General transcription factor IIH subunit 3.
   
 0.948
LOC115048985
General transcription factor IIH subunit 2-like.
   
 0.948
polr2a
RNA polymerase II subunit A.
    
 0.948
ENSENLP00000019785
General transcription factor IIH, polypeptide 1.
    
 0.945
ENSENLP00000028710
General transcription factor IIH, polypeptide 4.
    
 0.941
ENSENLP00000049121
General transcription factor IIE, polypeptide 2, beta.
   
 0.940
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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