Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115043889Cyclin-dependent kinase inhibitor 1-like. (171 aa)    
Predicted Functional Partners:
LOC115058519
Cellular tumor antigen p53-like.
    
 0.993
skp2
S-phase kinase associated protein 2.
    
 0.983
cdk2
Cyclin dependent kinase 2.
   
 0.980
cdk4
Cyclin dependent kinase 4.
   
 0.977
cul1
Cullin 1.
    
 0.975
ENSENLP00000041560
Cyclin E1.
   
 0.974
cdk6
Cyclin dependent kinase 6.
   
 0.973
ccnd1
Cyclin D1.
   
 0.972
ENSENLP00000041077
annotation not available
   
 0.972
ENSENLP00000033919
Cyclin A1.
   
 0.969
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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