Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115054238Protein FAM111A-like. (622 aa)    
Predicted Functional Partners:
ENSENLP00000041349
VPS39 subunit of HOPS complex.
      
 0.617
ENSENLP00000020672
annotation not available
      
 0.591
nat8
N-acetyltransferase 8 (putative).
      
 0.589
dffb
DNA fragmentation factor subunit beta.
    
   0.584
nup42
Nucleoporin 42.
     
 0.562
LOC115051857
Protein SET-like.
   
   0.538
LOC115049318
Protein SET.
   
   0.538
ENSENLP00000011738
annotation not available
   
 
 0.523
rae1
Ribonucleic acid export 1.
   
 
  0.497
rpl10
Ribosomal protein L10.
    
   0.493
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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