STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc46a2Solute carrier family 46 member 2. (438 aa)    
Predicted Functional Partners:
mfsd10
Major facilitator superfamily domain containing 10.
   
  
 0.543
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.516
ENSENLP00000013097
Nipsnap homolog 3A (C. elegans).
   
  
 0.502
ENSENLP00000046878
Sushi domain containing 1.
    
 
 0.490
tdrd3
Tudor domain containing 3.
      
 0.487
ENSENLP00000051928
annotation not available
   
  
 0.470
ENSENLP00000007609
Danio rerio solute carrier family 29 member 4 (slc29a4), transcript variant 1, mRNA.
      
 0.455
slc29a3
Solute carrier family 29 member 3.
      
 0.451
glipr2
GLI pathogenesis related 2.
      
 0.416
ctsc
Cathepsin C.
      
 0.412
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.