STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000012237Zinc finger CCCH-type containing 13. (1886 aa)    
Predicted Functional Partners:
ENSENLP00000042496
Vir like m6A methyltransferase associated.
   
 
 0.997
wtap
WT1 associated protein.
    
 
 0.996
thoc1
THO complex 1.
   
 0.980
thoc3
THO complex 3.
    
 0.980
med4
Mediator complex subunit 4.
   
   0.977
med30
Mediator complex subunit 30.
   
   0.976
med29
Mediator complex subunit 29.
    
 
 0.976
rbm15
RNA binding motif protein 15.
   
 
 0.976
ENSENLP00000028253
Mediator complex subunit 23.
   
   0.976
LOC115060388
Mediator of RNA polymerase II transcription subunit 1-like.
   
   0.975
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.