STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000012237Zinc finger CCCH-type containing 13. (1886 aa)    
Predicted Functional Partners:
wtap
WT1 associated protein.
    
 0.999
ENSENLP00000042496
Vir like m6A methyltransferase associated.
   
 0.997
thoc1
THO complex 1.
   
 0.989
thoc3
THO complex 3.
    
 0.988
ENSENLP00000013909
THO complex 5.
   
 0.987
thoc7
THO complex 7.
   
 0.986
thoc6
THO complex 6.
    
 0.986
mettl14
Methyltransferase like 14.
   
 0.977
LOC115038273
Cleavage and polyadenylation specificity factor subunit 6-like.
   
 0.977
mettl3
Methyltransferase like 3.
   
 0.976
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.