STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
runx3RUNX family transcription factor 3. (423 aa)    
Predicted Functional Partners:
cbfb
Core-binding factor subunit beta.
    
 0.974
spi1
Spi-1 proto-oncogene.
   
 0.940
LOC115037612
Proto-oncogene c-Fos-like.
    
 0.939
mecom
MDS1 and EVI1 complex locus.
    
 0.918
hdac3
Histone deacetylase 3.
    
 0.913
ENSENLP00000014996
RUNX1 partner transcriptional co-repressor 1.
    
 0.908
cbfa2t3
CBFA2/RUNX1 partner transcriptional co-repressor 3.
    
 0.908
tbx21
T-box transcription factor 21.
   
 0.904
yap1
Yes associated protein 1.
    
 0.902
cebpa
CCAAT enhancer binding protein alpha.
    
 0.890
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.