Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
aar2AAR2 splicing factor. (387 aa)    
Predicted Functional Partners:
eftud2
Elongation factor Tu GTP binding domain containing 2.
    
 
 0.991
znhit2
Zinc finger HIT-type containing 2.
   
 
 0.990
ENSENLP00000022948
pre-mRNA processing factor 8.
    
 
 0.989
snrnp200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 
 0.989
ddx23
DEAD-box helicase 23.
    
 
 0.985
ENSENLP00000015834
Ecdysoneless homolog (Drosophila).
    
 
 0.983
eapp
E2F associated phosphoprotein.
    
 
 0.982
snrnp40
Small nuclear ribonucleoprotein U5 subunit 40.
    
 
 0.981
cd2bp2
CD2 cytoplasmic tail binding protein 2.
   
 
 0.971
ttc27
Tetratricopeptide repeat domain 27.
    
 
 0.932
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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