ENSENLP00000012261 protein (Echeneis naucrates)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSENLP00000012261

Recombination signal binding protein for immunoglobulin kappa J region-like. (456 aa)

Predicted Functional Partners:

ENSENLP00000018768

0.961

maml2

0.897

maml3

0.889

LOC115041727

0.879

ENSENLP00000043678

0.879

LOC115047592

0.879

LOC115048350

0.865

LOC115051771

0.865

HDAC2

0.864

cir1

0.861

Your Current Organism:

Echeneis naucrates

NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSENLP00000012261	ENSENLP00000018768	ENSENLP00000012261	ENSENLP00000018768	Recombination signal binding protein for immunoglobulin kappa J region-like.	Mastermind-like transcriptional coactivator 1.	0.961
ENSENLP00000012261	ENSENLP00000043678	ENSENLP00000012261	ENSENLP00000043678	Recombination signal binding protein for immunoglobulin kappa J region-like.	Nuclear receptor corepressor 2.	0.879
ENSENLP00000012261	HDAC2	ENSENLP00000012261	ENSENLP00000039137	Recombination signal binding protein for immunoglobulin kappa J region-like.	Histone deacetylase 2.	0.864
ENSENLP00000012261	LOC115041727	ENSENLP00000012261	ENSENLP00000040344	Recombination signal binding protein for immunoglobulin kappa J region-like.	Neurogenic locus notch homolog protein 2-like.	0.879
ENSENLP00000012261	LOC115047592	ENSENLP00000012261	ENSENLP00000054409	Recombination signal binding protein for immunoglobulin kappa J region-like.	Neurogenic locus notch homolog protein 2-like.	0.879
ENSENLP00000012261	LOC115048350	ENSENLP00000012261	ENSENLP00000027464	Recombination signal binding protein for immunoglobulin kappa J region-like.	Neurogenic locus notch homolog protein 1-like.	0.865
ENSENLP00000012261	LOC115051771	ENSENLP00000012261	ENSENLP00000044559	Recombination signal binding protein for immunoglobulin kappa J region-like.	Neurogenic locus notch homolog protein 1-like.	0.865
ENSENLP00000012261	cir1	ENSENLP00000012261	ENSENLP00000048853	Recombination signal binding protein for immunoglobulin kappa J region-like.	Corepressor interacting with RBPJ, 1.	0.861
ENSENLP00000012261	maml2	ENSENLP00000012261	ENSENLP00000010293	Recombination signal binding protein for immunoglobulin kappa J region-like.	Mastermind like transcriptional coactivator 2.	0.897
ENSENLP00000012261	maml3	ENSENLP00000012261	ENSENLP00000017789	Recombination signal binding protein for immunoglobulin kappa J region-like.	Mastermind like transcriptional coactivator 3.	0.889
ENSENLP00000018768	ENSENLP00000012261	ENSENLP00000018768	ENSENLP00000012261	Mastermind-like transcriptional coactivator 1.	Recombination signal binding protein for immunoglobulin kappa J region-like.	0.961
ENSENLP00000018768	LOC115041727	ENSENLP00000018768	ENSENLP00000040344	Mastermind-like transcriptional coactivator 1.	Neurogenic locus notch homolog protein 2-like.	0.855
ENSENLP00000018768	LOC115047592	ENSENLP00000018768	ENSENLP00000054409	Mastermind-like transcriptional coactivator 1.	Neurogenic locus notch homolog protein 2-like.	0.828
ENSENLP00000018768	LOC115048350	ENSENLP00000018768	ENSENLP00000027464	Mastermind-like transcriptional coactivator 1.	Neurogenic locus notch homolog protein 1-like.	0.991
ENSENLP00000018768	LOC115051771	ENSENLP00000018768	ENSENLP00000044559	Mastermind-like transcriptional coactivator 1.	Neurogenic locus notch homolog protein 1-like.	0.991
ENSENLP00000018768	maml2	ENSENLP00000018768	ENSENLP00000010293	Mastermind-like transcriptional coactivator 1.	Mastermind like transcriptional coactivator 2.	0.924
ENSENLP00000018768	maml3	ENSENLP00000018768	ENSENLP00000017789	Mastermind-like transcriptional coactivator 1.	Mastermind like transcriptional coactivator 3.	0.920
ENSENLP00000043678	ENSENLP00000012261	ENSENLP00000043678	ENSENLP00000012261	Nuclear receptor corepressor 2.	Recombination signal binding protein for immunoglobulin kappa J region-like.	0.879
ENSENLP00000043678	HDAC2	ENSENLP00000043678	ENSENLP00000039137	Nuclear receptor corepressor 2.	Histone deacetylase 2.	0.951
ENSENLP00000043678	cir1	ENSENLP00000043678	ENSENLP00000048853	Nuclear receptor corepressor 2.	Corepressor interacting with RBPJ, 1.	0.884