STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115041177Retinaldehyde-binding protein 1-like. (312 aa)    
Predicted Functional Partners:
ENSENLP00000024909
Ankyrin repeat and FYVE domain containing 1.
    
  0.640
LOC115044077
Retinol dehydrogenase 10-like.
   
  0.542
sdr16c5
Short chain dehydrogenase/reductase family 16C member 5.
   
  0.542
rdh10
Retinol dehydrogenase 10.
   
  0.542
LOC115043857
Retinol dehydrogenase 10-B-like.
   
  0.542
dhrs3
Dehydrogenase/reductase 3.
   
  0.542
ENSENLP00000011653
DnaJ (Hsp40) homolog, subfamily C, member 10.
   
 0.479
sec63
SEC63 homolog, protein translocation regulator.
   
 
 0.479
ENSENLP00000016318
Retinol dehydrogenase 1.
   
 0.473
LOC115035211
Retinol dehydrogenase 7-like.
   
 0.473
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.