STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115041177Retinaldehyde-binding protein 1-like. (312 aa)    
Predicted Functional Partners:
LOC115044077
Retinol dehydrogenase 10-like.
   
 0.627
rdh10
Retinol dehydrogenase 10.
   
 0.627
LOC115043857
Retinol dehydrogenase 10-B-like.
   
 0.627
sdr16c5
Short chain dehydrogenase/reductase family 16C member 5.
   
  0.616
dhrs3
Dehydrogenase/reductase 3.
   
  0.616
ENSENLP00000043091
INO80 complex ATPase subunit.
    
   0.590
mrgbp
MRG domain binding protein.
    
   0.589
vps72
Vacuolar protein sorting 72 homolog.
    
   0.585
dmap1
DNA methyltransferase 1 associated protein 1.
    
   0.577
ENSENLP00000016318
Retinol dehydrogenase 1.
    
 0.560
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.