Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115047546Rho GTPase-activating protein 17-like. (813 aa)    
Predicted Functional Partners:
ENSENLP00000008554
Angiomotin.
    
 0.956
RAC1
Rac family small GTPase 1.
   
  0.918
LOC115050655
Cell division control protein 42 homolog.
   
 0.914
LOC115044845
Cell division control protein 42 homolog.
   
 0.914
CDC42
Cell division control protein 42 homolog.
   
 0.909
LOC115043060
Cell division control protein 42 homolog.
   
 0.909
LOC115048124
Ras-related C3 botulinum toxin substrate 1-like.
   
  0.903
LOC115039180
Ras-related C3 botulinum toxin substrate 2.
   
  0.903
amotl2
Angiomotin like 2.
    
 0.899
LOC115058174
Angiomotin-like 2a.
    
 0.899
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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