STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tchpTrichoplein keratin filament binding. (499 aa)    
Predicted Functional Partners:
ENSENLP00000006812
Ninein (GSK3B interacting protein).
     
 0.817
ENSENLP00000022832
annotation not available
   
 
 0.814
ENSENLP00000010461
annotation not available
   
  0.810
ENSENLP00000010507
annotation not available
   
  0.810
mdm2
MDM2 proto-oncogene.
     
 0.783
ENSENLP00000036993
MDM4 regulator of p53.
     
 0.734
pla2g15
Phospholipase A2 group XV.
   
 
 0.731
lcat
Lecithin-cholesterol acyltransferase.
   
 
 0.731
lypla2
Lysophospholipase 2.
     
 0.718
lypla1
Lysophospholipase 1.
     
 0.718
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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