Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000012290Si:ch211-239f4.1. (730 aa)    
Predicted Functional Partners:
rab11a
RAB11A, member RAS oncogene family.
    
 0.798
LOC115041789
Ras-related protein Rab-11B-like.
    
 0.798
LOC115041662
Ras-related protein Rab-11B.
    
 0.798
LOC115045395
Ras-related protein Rab-11A-like.
    
 0.798
LOC115057175
Ras-related protein Rab-11B-like.
    
 0.798
mrpl30
Mitochondrial ribosomal protein L30.
      
 0.688
ENSENLP00000032138
annotation not available
    
 0.687
rab14
RAB14, member RAS oncogene family.
    
 0.687
ENSENLP00000054282
A kinase (PRKA) anchor protein 17A.
      
 0.667
dnajc27
DnaJ heat shock protein family (Hsp40) member C27.
    
 0.657
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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