STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115045729Cysteine sulfinic acid decarboxylase-like. (509 aa)    
Predicted Functional Partners:
cdo1
Cysteine dioxygenase type 1.
     
 0.937
ENSENLP00000003524
Gamma-glutamyltransferase 5a.
    
 0.922
GGT7
Gamma-glutamyltransferase 7.
    
 0.922
LOC115051941
Glutathione hydrolase 5 proenzyme-like.
    
 0.922
ggtlc3
Gamma-glutamyltransferase light chain family member 3.
    
 0.922
LOC115060060
2-aminoethanethiol dioxygenase-like.
     
 0.920
eprs1
glutamyl-prolyl-tRNA synthetase 1.
    
 0.918
ENSENLP00000003997
Si:dkey-222h21.12.
    
 0.911
ado
2-aminoethanethiol dioxygenase.
     
 0.909
ENSENLP00000005172
Aldehyde dehydrogenase 18 family, member A1.
    
 0.908
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.