STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000012329Transient receptor potential cation channel, subfamily C, member 7b. (842 aa)    
Predicted Functional Partners:
trpc1
Transient receptor potential cation channel subfamily C member 1.
  
 
0.807
LOC115047021
Protein kinase C alpha type.
   
 0.704
PRKCA
Protein kinase C alpha.
   
 0.704
ENSENLP00000037691
Protein kinase C, gamma.
   
 0.704
ENSENLP00000039408
Protein kinase C, beta a.
   
 0.704
ENSENLP00000039568
annotation not available
   
 0.704
PRKCB
Protein kinase C beta.
   
 0.704
lnx1
Ligand of numb-protein X 1.
   
 0.686
lnx2
Ligand of numb-protein X 2.
   
 0.686
ENSENLP00000031736
PATJ crumbs cell polarity complex component.
   
 0.686
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.