STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115047759WD repeat domain phosphoinositide-interacting protein 1-like. (440 aa)    
Predicted Functional Partners:
ATG2B
Autophagy related 2B.
    
 0.981
ENSENLP00000054659
Autophagy related 2A.
    
 0.981
LOC115053306
Autophagy-related protein 16-2-like.
   
 0.977
ENSENLP00000035253
annotation not available
    
 0.941
atg5
Autophagy related 5.
    
 0.934
atg12
Autophagy related 12.
    
 0.931
LOC115052734
Autophagy-related protein 16-1-like.
   
 0.916
LOC115052734-2
Autophagy-related protein 16-1-like.
   
 0.916
becn1
Beclin 1.
    
 0.904
ENSENLP00000011233
WD repeat domain, phosphoinositide interacting 2.
  
  
 
0.903
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.