Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115047759WD repeat domain phosphoinositide-interacting protein 1-like. (440 aa)    
Predicted Functional Partners:
ATG2B
Autophagy related 2B.
    
 0.980
ENSENLP00000054659
Autophagy related 2A.
    
 0.980
LOC115053306
Autophagy-related protein 16-2-like.
   
 0.977
LOC115052734
Autophagy-related protein 16-1-like.
   
 0.973
LOC115052734-2
Autophagy-related protein 16-1-like.
   
 0.973
atg5
Autophagy related 5.
    
 0.964
atg12
Autophagy related 12.
    
 0.955
LOC115058074
Autophagy-related protein 9A-like.
   
 0.951
atg9a
Autophagy related 9A.
   
 0.946
wdr45b
WD repeat domain 45B.
   
 0.916
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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