Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000012380annotation not available (515 aa)    
Predicted Functional Partners:
ifih1
Interferon induced with helicase C domain 1.
   
 0.542
ro60
Ro60, Y RNA binding protein.
    
 0.540
dhx58
DExH-box helicase 58.
    
 0.534
LOC115061461
Cytotoxic T-lymphocyte protein 4-like.
    
  0.525
DDX41
DEAD-box helicase 41.
    
  0.499
rps27a
Ribosomal protein S27a.
    
  0.484
LOC115053350
Caspase-1-like.
    
  0.482
ENSENLP00000011562
Sequestosome 1.
    
 0.476
LOC115051662
Ubiquitin-conjugating enzyme E2 L3-like.
    
  0.468
LOC115044991
Protein argonaute-1.
    
 0.467
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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