STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vps52VPS52 subunit of GARP complex. (724 aa)    
Predicted Functional Partners:
vps53
VPS53 subunit of GARP complex.
   
 0.997
ENSENLP00000053800
VPS51 subunit of GARP complex.
   
 0.997
vps50
VPS50 subunit of EARP/GARPII complex.
   
 0.996
ENSENLP00000022199
VPS54 subunit of GARP complex.
    
 0.991
ENSENLP00000022373
VPS54 subunit of GARP complex.
    
 0.991
eipr1
EARP complex and GARP complex interacting protein 1.
    
 0.985
ENSENLP00000037546
Indian hedgehog signaling molecule b.
    
 0.912
shh
Sonic hedgehog signaling molecule.
    
 0.912
dhh
Desert hedgehog signaling molecule.
    
 0.912
LOC115061822
Indian hedgehog B protein-like.
    
 0.912
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.