STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115056407Two pore calcium channel protein 1-like. (774 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.998
tpcn2
Two pore segment channel 2.
    
0.856
wdr35
WD repeat domain 35.
    
 0.809
IFT122
Intraflagellar transport 122.
   
 0.804
ENSENLP00000026534
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.786
ENSENLP00000044550
annotation not available
    
 0.784
LOC115051533
Sodium channel subunit beta-1-like.
    
 0.764
ENSENLP00000024149
Sodium channel, voltage-gated, type I, beta a.
    
 0.764
cacng1
Calcium voltage-gated channel auxiliary subunit gamma 1.
   
 0.759
LOC115048055
Voltage-dependent calcium channel gamma-1 subunit-like.
   
 0.759
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.