STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000016915annotation not available (420 aa)    
Predicted Functional Partners:
ENSENLP00000004347
Ubiquitin B.
    
  0.622
rps27a
Ribosomal protein S27a.
    
  0.613
supt16h
SPT16 homolog, facilitates chromatin remodeling subunit.
    
 0.505
ENSENLP00000035060
annotation not available
    
  0.505
LOC115051662
Ubiquitin-conjugating enzyme E2 L3-like.
    
  0.503
zfand4
Zinc finger AN1-type containing 4.
    
  0.500
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
    
  0.489
ENSENLP00000022805
ISG15 ubiquitin like modifier.
    
  0.488
ENSENLP00000022822
ISG15 ubiquitin like modifier.
    
  0.488
LOC115058742
Polyubiquitin-like.
    
  0.488
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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