STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000017137Vimentin-related 1. (472 aa)    
Predicted Functional Partners:
ENSENLP00000010745
annotation not available
   
 0.738
LOC115054183
Barrier-to-autointegration factor.
   
 0.738
ENSENLP00000022766
annotation not available
    
 0.735
ENSENLP00000002019
annotation not available
    
 
0.664
tcap
Titin-cap.
   
 
 0.639
ENSENLP00000002938
RNA binding motif protein 39b.
    
 0.629
lemd3
LEM domain containing 3.
    
 0.629
ENSENLP00000053251
annotation not available
    
 0.629
sun2
Sad1 and UNC84 domain containing 2.
    
 0.557
ENSENLP00000024197
annotation not available
    
 0.557
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.