STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rad1RAD1 checkpoint DNA exonuclease. (277 aa)    
Predicted Functional Partners:
ENSENLP00000003770
RAD9 checkpoint clamp component A.
    
 0.999
hus1
HUS1 checkpoint clamp component.
    
 0.999
rad17
RAD17 checkpoint clamp loader component.
   
 0.994
slf1
SMC5-SMC6 complex localization factor 1.
    
 0.993
rfc4
Replication factor C subunit 4.
   
 0.993
rfc5
Replication factor C subunit 5.
   
 0.984
cdca7l
Cell division cycle associated 7 like.
    
 0.984
cdca7
Cell division cycle associated 7.
    
 0.984
ENSENLP00000047936
ATR serine/threonine kinase.
    
 0.983
rhno1
RAD9-HUS1-RAD1 interacting nuclear orphan 1.
    
  0.975
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.