STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115049695Protocadherin gamma-A10-like. (827 aa)    
Predicted Functional Partners:
fjx1
Four-jointed box kinase 1.
   
 0.590
fat1
FAT atypical cadherin 1.
    
 
0.520
fat2
FAT atypical cadherin 2.
    
 
0.520
ENSENLP00000006139
annotation not available
    
  0.495
ctnnb1
Catenin beta 1.
    
  0.495
uckl1
Uridine-cytidine kinase 1 like 1.
    
  0.495
uck1
Uridine-cytidine kinase 1.
    
  0.495
LOC115049769
Junction plakoglobin-like.
    
  0.495
ENSENLP00000028671
Si:ch211-243j20.2.
    
  0.495
LOC115057760
Uridine-cytidine kinase 2-B.
    
  0.495
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.