STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rcor1REST corepressor 1. (452 aa)    
Predicted Functional Partners:
kdm1a
Lysine demethylase 1A.
   
 0.987
ENSENLP00000020224
PHD finger protein 21Ab.
   
 0.925
KDM1B
Lysine demethylase 1B.
   
 0.910
ENSENLP00000016141
Monoamine oxidase.
    
 0.907
LOC115052354
Probable flavin-containing monoamine oxidase A.
    
 0.907
ENSENLP00000017745
annotation not available
    
 0.882
LOC115050840
Probable histone deacetylase 1-B.
    
 0.882
hmg20b
High mobility group 20B.
   
 0.875
LOC115049793
RE1-silencing transcription factor B-like.
    
 0.866
ENSENLP00000013249
annotation not available
    
 0.866
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.