rpgrip1l protein (Echeneis naucrates) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

rpgrip1l

RPGRIP1 like. (1277 aa)

Predicted Functional Partners:

nphp4

0.945

ENSENLP00000000564

0.945

ENSENLP00000004882

0.939

ENSENLP00000028784

0.842

rab11a

0.770

LOC115041789

0.770

LOC115041662

0.770

LOC115045395

0.770

LOC115057175

0.770

ENSENLP00000035099

0.747

Your Current Organism:

Echeneis naucrates

NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSENLP00000000564	ENSENLP00000004882	ENSENLP00000000564	ENSENLP00000004882	annotation not available	Nephronophthisis 1.	0.959
ENSENLP00000000564	ENSENLP00000028784	ENSENLP00000000564	ENSENLP00000028784	annotation not available	annotation not available	0.737
ENSENLP00000000564	nphp4	ENSENLP00000000564	ENSENLP00000000511	annotation not available	Nephrocystin 4.	0.719
ENSENLP00000000564	rpgrip1l	ENSENLP00000000564	ENSENLP00000020606	annotation not available	RPGRIP1 like.	0.945
ENSENLP00000004882	ENSENLP00000000564	ENSENLP00000004882	ENSENLP00000000564	Nephronophthisis 1.	annotation not available	0.959
ENSENLP00000004882	ENSENLP00000028784	ENSENLP00000004882	ENSENLP00000028784	Nephronophthisis 1.	annotation not available	0.801
ENSENLP00000004882	LOC115041662	ENSENLP00000004882	ENSENLP00000007860	Nephronophthisis 1.	Ras-related protein Rab-11B.	0.606
ENSENLP00000004882	LOC115041789	ENSENLP00000004882	ENSENLP00000007546	Nephronophthisis 1.	Ras-related protein Rab-11B-like.	0.606
ENSENLP00000004882	LOC115045395	ENSENLP00000004882	ENSENLP00000017414	Nephronophthisis 1.	Ras-related protein Rab-11A-like.	0.606
ENSENLP00000004882	LOC115057175	ENSENLP00000004882	ENSENLP00000024212	Nephronophthisis 1.	Ras-related protein Rab-11B-like.	0.606
ENSENLP00000004882	nphp4	ENSENLP00000004882	ENSENLP00000000511	Nephronophthisis 1.	Nephrocystin 4.	0.959
ENSENLP00000004882	rab11a	ENSENLP00000004882	ENSENLP00000007158	Nephronophthisis 1.	RAB11A, member RAS oncogene family.	0.606
ENSENLP00000004882	rpgrip1l	ENSENLP00000004882	ENSENLP00000020606	Nephronophthisis 1.	RPGRIP1 like.	0.939
ENSENLP00000028784	ENSENLP00000000564	ENSENLP00000028784	ENSENLP00000000564	annotation not available	annotation not available	0.737
ENSENLP00000028784	ENSENLP00000004882	ENSENLP00000028784	ENSENLP00000004882	annotation not available	Nephronophthisis 1.	0.801
ENSENLP00000028784	nphp4	ENSENLP00000028784	ENSENLP00000000511	annotation not available	Nephrocystin 4.	0.737
ENSENLP00000028784	rpgrip1l	ENSENLP00000028784	ENSENLP00000020606	annotation not available	RPGRIP1 like.	0.842
ENSENLP00000035099	rpgrip1l	ENSENLP00000035099	ENSENLP00000020606	Folliculin.	RPGRIP1 like.	0.747
LOC115041662	ENSENLP00000004882	ENSENLP00000007860	ENSENLP00000004882	Ras-related protein Rab-11B.	Nephronophthisis 1.	0.606
LOC115041662	LOC115045395	ENSENLP00000007860	ENSENLP00000017414	Ras-related protein Rab-11B.	Ras-related protein Rab-11A-like.	0.725