STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankrd54Ankyrin repeat domain 54. (325 aa)    
Predicted Functional Partners:
ENSENLP00000026836
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.823
ENSENLP00000043222
Intraflagellar transport 81 homolog.
    
 0.663
rps3
Ribosomal protein S3.
    
 0.645
mars1
methionyl-tRNA synthetase 1.
   
 0.644
ift22
Intraflagellar transport 22.
    
 0.632
traf7
TNF receptor associated factor 7.
    
  0.630
ift88
Intraflagellar transport 88.
   
 0.623
ift52
Intraflagellar transport 52.
    
 0.617
ift57
Intraflagellar transport 57.
    
 0.604
ENSENLP00000027901
WD repeat domain 90.
    
 0.597
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.