STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmp13Matrix metallopeptidase 13. (483 aa)    
Predicted Functional Partners:
TIMP3
Metalloproteinase inhibitor 3-like.
   
 0.884
timp2
TIMP metallopeptidase inhibitor 2.
   
 0.849
LOC115047451
Metalloproteinase inhibitor 2-like.
   
 0.848
mmp14
Matrix metallopeptidase 14.
  
 
0.726
mmp9
Matrix metallopeptidase 9.
   
0.714
LOC115057382
Matrix metalloproteinase-14-like.
  
0.701
ENSENLP00000024425
Tenascin C.
    
 0.699
mmp15
Matrix metallopeptidase 15.
  
0.698
tnn
Tenascin N.
   
 0.692
plg
Plasminogen.
   
 0.692
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (22%) [HD]