STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vps37cVPS37C subunit of ESCRT-I. (356 aa)    
Predicted Functional Partners:
vps28
VPS28 subunit of ESCRT-I.
   
 0.994
mvb12a
Multivesicular body subunit 12A.
   
 0.986
LOC115056408
Ubiquitin-conjugating enzyme E2 variant 3-like.
    
 0.982
tsg101
Tumor susceptibility 101.
    
 0.968
ENSENLP00000021869
annotation not available
    
 0.968
vps25
Vacuolar protein sorting 25 homolog.
    
 0.966
mvb12b
Multivesicular body subunit 12B.
   
 0.962
ENSENLP00000048215
Multivesicular body subunit 12Bb.
   
 0.962
snf8
SNF8 subunit of ESCRT-II.
     
 0.956
ENSENLP00000054124
Vacuolar protein sorting 36 homolog.
     
 0.956
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.