STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ungUracil DNA glycosylase. (300 aa)    
Predicted Functional Partners:
ENSENLP00000000360
Nth-like DNA glycosylase 1.
   
 0.933
pcna
Proliferating cell nuclear antigen.
  
 
 0.924
ddb1
Damage specific DNA binding protein 1.
    
 
 0.918
LOC115043904
DDB1- and CUL4-associated factor 1-like.
    
 
 0.900
DCAF1
DDB1 and CUL4 associated factor 1.
    
 
 0.900
apex1
Apurinic/apyrimidinic endodeoxyribonuclease 1.
  
 0.894
apex2
Apurinic/apyrimidinic endodeoxyribonuclease 2.
  
 0.871
LOC115059682
Probable endonuclease 4.
   
 
 0.826
ENSENLP00000017466
annotation not available
  
 0.818
ENSENLP00000017583
annotation not available
  
 0.818
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.