STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115057412WW domain-containing adapter protein with coiled-coil-like. (539 aa)    
Predicted Functional Partners:
ENSENLP00000026836
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.980
sf3b3
Splicing factor 3b subunit 3.
    
 0.979
ENSENLP00000049286
Splicing factor 3b, subunit 2.
   
 0.979
ENSENLP00000038886
RNA binding motif protein 25a.
   
 0.976
LOC115037346
RNA-binding protein 25-like.
   
 0.976
snrpe
Small nuclear ribonucleoprotein polypeptide E.
    
 0.976
ENSENLP00000018511
Small nuclear ribonucleoprotein 35 (U11/U12).
    
 0.975
snrpf
Small nuclear ribonucleoprotein polypeptide F.
    
 0.975
snrnp70
Small nuclear ribonucleoprotein U1 subunit 70.
    
 0.975
snrpg
Small nuclear ribonucleoprotein polypeptide G.
    
 0.974
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.