STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmed8Transmembrane p24 trafficking protein family member 8. (269 aa)    
Predicted Functional Partners:
ENSENLP00000005172
Aldehyde dehydrogenase 18 family, member A1.
  
 
 0.879
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase-like.
  
 
 0.879
l3hypdh
trans-L-3-hydroxyproline dehydratase.
    
 0.828
aldh4a1
Aldehyde dehydrogenase 4 family member A1.
  
 0.788
ENSENLP00000041504
Crystallin, mu.
  
 
 0.780
ENSENLP00000015545
Aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase).
  
 
 0.753
LOC115048759
Proline dehydrogenase 1, mitochondrial-like.
   
 0.686
LOC115051783
Proline dehydrogenase 1, mitochondrial-like.
   
 0.686
prodh2
Proline dehydrogenase 2.
   
 0.686
oat
Ornithine aminotransferase.
  
  
 0.667
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.