STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000023839RAB, member RAS oncogene family-like 6b. (708 aa)    
Predicted Functional Partners:
trappc1
Trafficking protein particle complex 1.
    
 0.898
trappc4
Trafficking protein particle complex 4.
    
 0.887
trappc2
Trafficking protein particle complex 2.
    
 0.884
trappc8
Trafficking protein particle complex 8.
    
 0.877
ENSENLP00000054153
USO1 vesicle transport factor.
   
 0.857
LOC115037851
Lebercilin-like.
    
 0.829
trappc3
Trafficking protein particle complex 3.
    
 0.829
rabggtb
Rab geranylgeranyltransferase subunit beta.
    
 0.821
stx5
Syntaxin 5.
    
 0.812
lyrm4
LYR motif containing 4.
    
 0.809
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.