STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
npm3Nucleophosmin/nucleoplasmin 3. (165 aa)    
Predicted Functional Partners:
ENSENLP00000053065
Nucleophosmin 1a.
   
 
0.756
LOC115050168
Nucleophosmin-like.
  
 
0.747
ogt
O-linked N-acetylglucosamine (GlcNAc) transferase.
   
 
 0.628
tmem167a
Transmembrane protein 167A.
      
 0.521
mrpl41
Mitochondrial ribosomal protein L41.
    
  0.518
ENSENLP00000003962
Fibroblast growth factor 8a.
    
 
 0.499
ENSENLP00000015623
annotation not available
    
 
 0.479
ncl
Nucleolin.
    
 
 0.479
mrpl11
Mitochondrial ribosomal protein L11.
   
  0.478
mrpl3
Mitochondrial ribosomal protein L3.
    
  0.459
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.