STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rwdd2bRWD domain containing 2B. (300 aa)    
Predicted Functional Partners:
LOC115047157
SUMO-conjugating enzyme UBC9-like.
    
  0.830
ube2i
Ubiquitin conjugating enzyme E2 I.
    
  0.830
kctd2
Potassium channel tetramerization domain containing 2.
    
  0.795
gadd45g
Growth arrest and DNA damage inducible gamma.
    
 
 0.751
ENSENLP00000010772
SUMO1 activating enzyme subunit 1.
    
 0.691
ENSENLP00000012386
Ubiquitin-like modifier activating enzyme 2.
    
  0.609
sumo1
Small ubiquitin like modifier 1.
   
  0.582
ercc6
ERCC excision repair 6, chromatin remodeling factor.
    
  0.524
pofut2
Protein O-fucosyltransferase 2.
      
 0.521
ENSENLP00000038661
ybeY metalloendoribonuclease.
      
 0.491
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.