STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sppl3Signal peptide peptidase like 3. (387 aa)    
Predicted Functional Partners:
derl1
Derlin 1.
   
 0.831
LOC115052084
Derlin-2.
   
 0.831
LOC115049050
Derlin-2-like.
   
 0.831
ENSENLP00000003632
annotation not available
     
 0.683
sel1l3
SEL1L family member 3.
     
 0.683
sel1l
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
     
 0.683
vcp
Valosin containing protein.
   
 0.615
SPATA5
Spermatogenesis associated 5.
   
 0.615
ndufb7
NADH:ubiquinone oxidoreductase subunit B7.
   
 0.615
spata5l1
Spermatogenesis associated 5 like 1.
   
 0.615
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.