Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC115061077 | simc1 | ENSENLP00000030928 | ENSENLP00000014254 | Actin cytoskeleton-regulatory complex protein pan1-like. | SUMO interacting motifs containing 1. | 0.636 |
LOC115061077 | usf3 | ENSENLP00000030928 | ENSENLP00000026509 | Actin cytoskeleton-regulatory complex protein pan1-like. | Upstream transcription factor family member 3. | 0.402 |
LOC115061077 | zbtb8a | ENSENLP00000030928 | ENSENLP00000019186 | Actin cytoskeleton-regulatory complex protein pan1-like. | Zinc finger and BTB domain containing 8A. | 0.443 |
simc1 | LOC115061077 | ENSENLP00000014254 | ENSENLP00000030928 | SUMO interacting motifs containing 1. | Actin cytoskeleton-regulatory complex protein pan1-like. | 0.636 |
simc1 | usf3 | ENSENLP00000014254 | ENSENLP00000026509 | SUMO interacting motifs containing 1. | Upstream transcription factor family member 3. | 0.462 |
simc1 | zbtb8a | ENSENLP00000014254 | ENSENLP00000019186 | SUMO interacting motifs containing 1. | Zinc finger and BTB domain containing 8A. | 0.493 |
usf3 | LOC115061077 | ENSENLP00000026509 | ENSENLP00000030928 | Upstream transcription factor family member 3. | Actin cytoskeleton-regulatory complex protein pan1-like. | 0.402 |
usf3 | simc1 | ENSENLP00000026509 | ENSENLP00000014254 | Upstream transcription factor family member 3. | SUMO interacting motifs containing 1. | 0.462 |
usf3 | zbtb8a | ENSENLP00000026509 | ENSENLP00000019186 | Upstream transcription factor family member 3. | Zinc finger and BTB domain containing 8A. | 0.472 |
zbtb8a | LOC115061077 | ENSENLP00000019186 | ENSENLP00000030928 | Zinc finger and BTB domain containing 8A. | Actin cytoskeleton-regulatory complex protein pan1-like. | 0.443 |
zbtb8a | simc1 | ENSENLP00000019186 | ENSENLP00000014254 | Zinc finger and BTB domain containing 8A. | SUMO interacting motifs containing 1. | 0.493 |
zbtb8a | usf3 | ENSENLP00000019186 | ENSENLP00000026509 | Zinc finger and BTB domain containing 8A. | Upstream transcription factor family member 3. | 0.472 |